Genotype constellation
WebJan 7, 2024 · To date, full genome information is available for 12 feline RVA strains, which have six different genotype constellations: FRV-1, FRV317, and FRV384 (G3-P [9]-I3-R3-C3-M3-A3-N3-T3-E3-H3); Cat97, FRV64, FRV72, FRV73, and FRV303 (G3-P [3]-I3-R3-C2-M3-A9-N2-T3-E3-H6); FRV348 (G3-P [3]-I3-R3-C3-M3-A15-N3-T3-E3-H6); BA222 (G3 … WebFeb 11, 2024 · The G2P[4] genotype is among the rotavirus strains that circulate commonly in humans. Several countries have reported its immediate upsurge after the introduction of rotavirus vaccination, raising concern about sub-optimal vaccine effectiveness against this genotype in the long term.
Genotype constellation
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WebJan 3, 2024 · The VP7 and VP4 genes of this FRV isolate were consistent with the genotype G3P[9], a commonly found FRV genotype, and it was therefore designated as … WebJul 10, 2024 · Group A rotaviruses are the major causative agents of pediatric gastroenteritis worldwide. Several studies have reported the predominance of G4P[6] rotavirus genotypes in Korean neonates, which is uncommon in other countries. Therefore, the purposes of this study were to determine the genotype constellations of complete genomes of G4P[6] …
WebFeb 27, 2024 · The genotype constellation of strain SC11 was G9-P[23]-I12-R1-C1-M1-A1-N1-T1-E1-H1, according to whole-genome sequencing analysis. The VP1, VP2, VP4, VP6, NSP1–NSP3, and NSP5 genes of RVA strain SC11 were found to be closely related to those of porcine and/or porcine-like human RVAs. Meanwhile, the VP7 and NSP4 genes … WebThose genotype constellations have been designated vertical bar 1-R1-C1-M1-A1-N1-T1-E1-H1 and I2-R2-C2-M2-A2-N2-T2-E2-H2 and are also known as Wa-like and DS-1-like, respectively.
WebApr 16, 2024 · Genetic analysis revealed that these viruses had typical DS-1-like genotype constellation and showed evidence of re-assortment in … WebFeb 11, 2024 · A binary typing system based on the nucleotide sequences of genome segments encoding the VP7 glycoprotein (G genotypes) and the protease-sensitive VP4 (P genotypes) is commonly used. A large variety of VP7 and VP4 has been described, allowing a classification into 36 G and 51 P genotypes, respectively [ 6 ].
WebNov 1, 2016 · Comparison of the complete genotype constellations of the 12 strains with those of other G8 and non-G8 strains is shown in Fig 1. With the exception of the G genotype, the 12 strains had a unique genotype constellation (P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2), which is commonly found in DS-1-like intergenogroup reassortant strains [19, …
WebMay 29, 2024 · The classification system commonly used for RVA is binary and is based on the sequences of the VP7 (G genotype) and VP4 (P genotype) genes. In addition, a … shared office space sacramentoWebMar 12, 2024 · In recent years, whole-genome-based phylogenetic analyses using next-generation sequencing (NGS) data have been used to define the genotype constellations of RVA strains and most human RVA strains show high similarity in all segments to either the Wa-like genogroup 1 constellation (Gx-P[x]-I1-R1-C1-M1-A1-N1-T1-E1-H1) or the … pool table near rock hill scshared office space san diegoWebAt Least Seven Distinct Rotavirus Genotype Constellations in Bats with Evidence of Reassortment and Zoonotic Transmissions - PMC Back to Top Skip to main content An … pool table number systemWebGenotype G1P[8] is the most common circulating strain accounting for 50–65% of all strains in developed and in some developing countries [Banyai et al., 2012]. In Africa, … shared office space scottsdaleWebFeb 10, 2024 · The genotype constellation was G6-P[14]-I2-R2-C2-M2-A11-N2-T6-E2-H3. Phylogenetic analysis showed that M0084 was a reassortant strain from RVAs of both artiodactyl and human host species origin. The level of sequence identity of the individual genes of M0084 to other sequences in the GenBank ranged from 95.2 to 99.5%; … shared office space seattleWebDec 15, 2024 · In this study, we established a reverse genetics system for G2P [4] human RV strain HN126. Nucleotide sequence analysis, including that of the terminal ends of the viral double-stranded RNA genome, revealed that HN126 possessed a DS-1-like genotype constellation. Eleven plasmids, each encoding 11 gene segments of the RV genome, … shared office space scottsdale az